| Light; Chemical treatment | CC-4532 | light; Tris medium (–Fe) | | GSE101944 | | | |
| Light; Chemical treatment | CC-4532 | light; Tris medium (+Fe) | | GSE101944 | | | |
| Chemical treatment | FACHB-1121 | 0 mg/L AgNPs | 2hr | GSE117986 | | | |
| Chemical treatment | FACHB-1121 | 0 mg/L AgNPs | 12hr | GSE117986 | | | |
| Chemical treatment | FACHB-1121 | 0.5 mg/L AgNPs | 2hr | GSE117986 | | | |
| Chemical treatment | FACHB-1121 | 0.5 mg/L AgNPs | 12hr | GSE117986 | | | |
| Oxygen availability;Chemical treatment | CC849 | aerobic;sufficient sulfur | 4hr | GSE118847 | | | |
| Oxygen availability;Chemical treatment | CC849 | aerobic;sufficient sulfur | 12hr | GSE118847 | | | |
| Oxygen availability;Chemical treatment | CC849 | anaerobic;sulfur depleted | 4hr | GSE118847 | | | |
| Oxygen availability;Chemical treatment | CC849 | anaerobic;sulfur depleted | 12hr | GSE118847 | | | |
| Gene mutant | CC125 | WT | | GSE122719 | | | |
| Gene mutant | CC125 | cmd1 KO | | GSE122719 | | | |
| Gene mutant | Elow47 | WT (Elow47) | | GSE128981 | | | |
| Gene mutant | UVM4 | srta mutant (UVM4) | | GSE128981 | | | |
| Gene mutant | UVM11 | srta mutant (UVM11) | | GSE128981 | | | |
| Gene mutant | UVM11-C1 | SRTA complemented (UVM11-C1) | | GSE128981 | | | |
| Gene mutant | UVM11-C9 | SRTA complemented (UVM11-C9) | | GSE128981 | | | |
| Light; Gene mutant; Chemical treatment | 6145c (WT) | light-dark; WT; nitrogen containing | 0hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | 6145c (WT) | light-dark; WT; nitrogen containing | 6hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | 6145c (WT) | light-dark; WT; nitrogen containing | 10hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | 6145c (WT) | light-dark; WT; nitrogen containing | 12hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | 6145c (WT) | constant light; WT; nitrogen deprivation | 6hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | 6145c (WT) | constant light; WT; nitrogen deprivation | 12hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | 6145c (WT) | constant light; WT; nitrogen deprivation | 36hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | 6145c (WT) | constant light; WT; nitrogen resupply | 6hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | 6145c (WT) | constant light; WT; nitrogen resupply | 12hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | cht7 | light-dark; cht7 mutant; nitrogen containing | 0hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | cht7 | light-dark; cht7 mutant; nitrogen containing | 6hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | cht7 | light-dark; cht7 mutant; nitrogen containing | 10hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | cht7 | light-dark; cht7 mutant; nitrogen containing | 12hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | cht7 | constant light; cht7 mutant; nitrogen deprivation | 6hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | cht7 | constant light; cht7 mutant; nitrogen deprivation | 12hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | cht7 | constant light; cht7 mutant; nitrogen deprivation | 36hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | cht7 | constant light; cht7 mutant; nitrogen resupply | 6hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | cht7 | constant light; cht7 mutant; nitrogen resupply | 12hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | CHT7HA::cht7 | light-dark; CHT7HA::cht7; nitrogen containing | 0hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | CHT7HA::cht7 | light-dark; CHT7HA::cht7; nitrogen containing | 6hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | CHT7HA::cht7 | light-dark; CHT7HA::cht7; nitrogen containing | 10hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | CHT7HA::cht7 | light-dark; CHT7HA::cht7; nitrogen containing | 12hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | CHT7HA::cht7 | constant light; CHT7HA::cht7; nitrogen deprivation | 6hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | CHT7HA::cht7 | constant light; CHT7HA::cht7; nitrogen deprivation | 12hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | CHT7HA::cht7 | constant light; CHT7HA::cht7; nitrogen deprivation | 36hr | GSE167405 | | | |
| Light; Gene mutant; Chemical treatment | CHT7HA::cht7 | constant light; CHT7HA::cht7; nitrogen resupply | 6hr | GSE167405 | | | |
| Light;Gene mutant;Chemical treatment | CHT7HA::cht7 | constant light;CHT7HA::cht7;nitrogen resupply | 12hr | GSE167405 | | | |
| Chemical treatment | CC4532 | 1000 µM Mn | | GSE169756 | | | |
| Chemical treatment | CC4532 | 6 µM Mn | | GSE169756 | | | |
| Chemical treatment | CC125 | 0.5 µM Ce | 2hr | GSE176268 | | | |
| Chemical treatment | CC125 | no treatment | 2hr | GSE176268 | | | |
| Chemical treatment | CC125 | Y, Ce, and Tm at 0.5 µM | 2hr | GSE176268 | | | |
| Chemical treatment | CC125 | 0.5 µM Yttrium | 2hr | GSE176268 | | | |
| Chemical treatment | CC125 | 0.5 µM Tm | 2hr | GSE176268 | | | |
| Chemical treatment | D66 | sulfur depleted | 6hr | GSE17970 | | | |
| Temperature | CC1690 | 25 °C (control) | preheat | GSE182207 | | | |
| Temperature | CC1690 | 35 °C (heat) | 0hr | GSE182207 | | | |
| Temperature | CC1690 | 35 °C (heat) | 30min | GSE182207 | | | |
| Temperature | CC1690 | 35 °C (heat) | 1hr | GSE182207 | | | |
| Temperature | CC1690 | 35 °C (heat) | 2hr | GSE182207 | | | |
| Temperature | CC1690 | 35 °C (heat) | 4hr | GSE182207 | | | |
| Temperature | CC1690 | 35 °C (heat) | 8hr | GSE182207 | | | |
| Temperature | CC1690 | 35 °C (heat) | 16hr | GSE182207 | | | |
| Temperature | CC1690 | 35 °C (heat) | 24hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 0hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 2hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 4hr | GSE182207 | | | |
| Temperature | CC1690 | 25 ° (recovery after 35 °C) | 8hr | GSE182207 | | | |
| Temperature | CC1690 | 25 ° (recovery after 35 °C) | 24hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 48hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (control) | preheat | GSE182207 | | | |
| Temperature | CC1690 | 40 °C (heat) | 0hr | GSE182207 | | | |
| Temperature | CC1690 | 40 °C (heat) | 30min | GSE182207 | | | |
| Temperature | CC1690 | 40 °C (heat) | 1hr | GSE182207 | | | |
| Temperature | CC1690 | 40 °C (heat) | 2hr | GSE182207 | | | |
| Temperature | CC1690 | 40 °C (heat) | 4hr | GSE182207 | | | |
| Temperature | CC1690 | 40 °C (heat) | 8hr | GSE182207 | | | |
| Temperature | CC1690 | 40 °C (heat) | 16hr | GSE182207 | | | |
| Temperature | CC1690 | 40 °C (heat) | 24hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 0hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 2hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 4hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 8hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 24hr | GSE182207 | | | |
| Temperature | CC1690 | 25 °C (recovery after 35 °C) | 48hr | GSE182207 | | | |
| Chemical treatment | GY-D55 | Control | 0hr | GSE191218 | | | |
| Chemical treatment | GY-D55 | 200 mM NaCl | 2hr | GSE191218 | | | |
| Chemical treatment | GY-D55 | 200 mM NaCl | 4hr | GSE191218 | | | |
| Chemical treatment | GY-D55 | 200 mM NaCl | 8hr | GSE191218 | | | |
| Chemical treatment | GY-D55 | 200 mM NaCl | 12hr | GSE191218 | | | |
| Chemical treatment | GY-D55 | 200 mM NaCl | 24hr | GSE191218 | | | |
| Chemical treatment | GY-D55 | 200 mM NaCl | 48hr | GSE191218 | | | |
| Chemical treatment | GY-D55 | 200 mM NaCl | 72hr | GSE191218 | | | |
| Chemical treatment | GY-D55 | 200 mM NaCl | 96hr | GSE191218 | | | |
| Light; Chemical treatment | CC125 | 5 photons m-2s-1 ; 0mM acetate | 15min | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 5 photons m-2s-1; 20mM acetate | 15min | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 5 photons m-2s-1; 0mM acetate | 4hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 5 photons m-2s-1; 20mM acetate | 4hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 300 photons m-2s-1; 0mM acetate | 4.25hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 300 photons m-2s-1; 20mM acetate | 4.25hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 300 photons m-2s-1; 0mM acetate | 5hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 300 photons m-2s-1; 20mM acetate | 5hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 5 photons m-2s-1; 0mM acetate | 24hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 5 photons m-2s-1; 20mM acetate | 24hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 300 photons m-2s-1; 0mM acetate | 24.25hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 300 photons m-2s-1; 20mM acetate | 24.25hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 300 photons m-2s-1; 0mM acetate | 25hr | GSE227281 | | | |
| Light; Chemical treatment | CC125 | 300 photons m-2s-1; 20mM acetate | 25hr | GSE227281 | | | |
| Light; Gene mutant | CC125 | 300 photons m-2s-1; PHOT knock-out mutant | 1hr | GSE227473 | | | |
| Light; Gene mutant | CC125 | 300 photons m-2s-1; WT | 1hr | GSE227473 | | | |
| Light; Gene mutant | CC125 | 5 photons m-2s-1; PHOT knock-out mutant | 1hr | GSE227473 | | | |
| Light; Gene mutant | CC125 | 5 photons m-2s-1; WT | 1hr | GSE227473 | | | |
| Chemical treatment | dw15.1 | 10 mM NH4+ | | GSE24365 | | | |
| Chemical treatment | dw15.1 | nitrogen deprivation | | GSE24365 | | | |
| Chemical treatment | CC3269 (2137) | TAP + revised trace element recipe | | GSE25622 | | | |
| Gene mutant | 4A+ | WT | | GSE33548 | | | |
| Gene mutant | 4A+ | sor1 mutant | | GSE33548 | | | |
| CO2; Gene mutant | CC125 | ranging from 300 to 500 ppm CO2; WT | | GSE33927 | | | |
| CO2; Gene mutant | CC125 | 5% CO2; WT | | GSE33927 | | | |
| CO2; Gene mutant | CC125 | ranging from 100 to 200 ppm CO2; WT | | GSE33927 | | | |
| CO2; Gene mutant | CC2702 | ranging from 300 to 500 ppm CO2; cia5 mutant | | GSE33927 | | | |
| CO2; Gene mutant | CC2702 | 5% CO2; cia5 mutant | | GSE33927 | | | |
| CO2; Gene mutant | CC2702 | ranging from 100 to 200 ppm CO2; cia5 mutant | | GSE33927 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 0hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 2min | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 4min | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 8min | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 12min | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 18min | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 24min | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 30min | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 45min | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | Nitrogen deficiency | 1hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 1st long time course Nitrogen deficiency | 0hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 1st long time course Nitrogen deficiency | 30min | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 1st long time course Nitrogen deficiency | 4hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 1st long time course Nitrogen deficiency | 8hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 2nd long time course Nitrogen deficiency | 0hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 2nd long time course Nitrogen deficiency | 2hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 2nd long time course Nitrogen deficiency | 8hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 2nd long time course Nitrogen deficiency | 12hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 2nd long time course Nitrogen deficiency | 24hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 2nd long time course Nitrogen deficiency | 48hr | GSE34585 | | | |
| Chemical treatment | CC3269 (2137) | 1 mM hydrogen peroxide | 0hr | GSE34826 | | | |
| Chemical treatment | CC3269 (2137) | 1 mM hydrogen peroxide | 30min | GSE34826 | | | |
| Chemical treatment | CC3269 (2137) | 1 mM hydrogen peroxide | 1hr | GSE34826 | | | |
| Chemical treatment;Medium Type | CC3269 (2137) | Fe replete;TAP medium | | GSE35305 | | | |
| Chemical treatment;Medium Type | CC3269 (2137) | Fe deficient;TAP medium | | GSE35305 | | | |
| Chemical treatment;Medium Type | CC3269 (2137) | Fe limited;TAP medium | | GSE35305 | | | |
| Chemical treatment;Medium Type | CC3269 (2137) | Fe replete;Minimal media | | GSE35305 | | | |
| Chemical treatment;Medium Type | CC3269 (2137) | Fe deficient;Minimal media | | GSE35305 | | | |
| Chemical treatment;Medium Type | CC3269 (2137) | Fe limited;Minimal media | | GSE35305 | | | |
| Light;Chemical treatment;Gene mutant | 4A+ | dark;0mM BV Ixalpha;WT | 0hr | GSE40031 | | | |
| Light;Chemical treatment;Gene mutant | 4A+ | light;0mM BV Ixalpha;WT | 30min | GSE40031 | | | |
| Light;Chemical treatment;Gene mutant | 4A+ | dark;0.1 mM BV Ixalpha;WT | 0hr | GSE40031 | | | |
| Light;Chemical treatment;Gene mutant | 4A+ | light;0.1mM BV Ixalpha;WT | 30min | GSE40031 | | | |
| Light;Chemical treatment;Gene mutant | hmox1 | dark;0 mM BV Ixalpha;hmox1 mutant | 0hr | GSE40031 | | | |
| Light;Chemical treatment;Gene mutant | hmox1 | light;0 mM BV Ixalpha;hmox1 mutant | 30min | GSE40031 | | | |
| Light;Chemical treatment;Gene mutant | hmox1 | dark;0.1 mM BV Ixalpha;hmox1 mutant | 0hr | GSE40031 | | | |
| Light;Chemical treatment;Gene mutant | hmox1 | light;0.1 mM BV Ixalpha;hmox1 mutant | 30min | GSE40031 | | | |
| Chemical treatment | CC3269 | zinc deprivation | | GSE41096 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | light; oxic; WT | | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark ;anoxic; WT | 30min | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; anoxic; WT | 6hr | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | light; oxic; crr1dCys mutant | | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; anoxic; crr1dCys mutant | 30min | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; anoxic; crr1dCys mutant | 6hr | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | light; oxic; crr1::CRR1 mutant | | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; anoxic;crr1::CRR1 mutant | 30min | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; anoxic;crr1::CRR1 mutant | 6hr | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | light; oxic;crr1::crr1 mutant | | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; anoxic;crr1::crr1 mutant | 30min | GSE42035 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; anoxic;crr1::crr1 mutant | 6hr | GSE42035 | | | |
| Cell Treatment | CC125 | pre-deflagellation | 0hr | GSE43004 | | | |
| Cell Treatment | CC125 | 3 min post-deflagellation | 3min | GSE43004 | | | |
| Cell Treatment | CC125 | 10 min post-deflagellation | 10min | GSE43004 | | | |
| Cell Treatment | CC125 | 30 min post-deflagellation | 30min | GSE43004 | | | |
| Cell Treatment | CC125 | 1hr post-deflagellation | 1hr | GSE43004 | | | |
| Chemical treatment | CC4532 | TAP medium without Fe-EDTA | 0hr | GSE44611 | | | |
| Chemical treatment | CC4532 | TAP medium without Fe-EDTA | 30min | GSE44611 | | | |
| Chemical treatment | CC4532 | TAP medium without Fe-EDTA | 1hr | GSE44611 | | | |
| Chemical treatment | CC4532 | TAP medium without Fe-EDTA | 2hr | GSE44611 | | | |
| Chemical treatment | CC4532 | TAP medium without Fe-EDTA | 4hr | GSE44611 | | | |
| Chemical treatment | CC4532 | TAP medium without Fe-EDTA | 8hr | GSE44611 | | | |
| Chemical treatment | CC4532 | TAP medium without Fe-EDTA | 12hr | GSE44611 | | | |
| Chemical treatment | CC4532 | TAP medium without Fe-EDTA | 24hr | GSE44611 | | | |
| Chemical treatment | CC4532 | TAP medium without Fe-EDTA | 48hr | GSE44611 | | | |
| Chemical treatment | CC4349 | minus nitrogen_x000D_ | 0hr | GSE51602 | | | |
| Chemical treatment | CC4349 | minus nitrogen | 30min | GSE51602 | | | |
| Chemical treatment | CC4349 | minus nitrogen | 2hr | GSE51602 | | | |
| Chemical treatment | CC4349 | minus nitrogen | 4hr | GSE51602 | | | |
| Chemical treatment | CC4349 | minus nitrogen | 8hr | GSE51602 | | | |
| Chemical treatment | CC4349 | minus nitrogen | 12hr | GSE51602 | | | |
| Chemical treatment | CC4349 | minus nitrogen | 24hr | GSE51602 | | | |
| Chemical treatment | CC4349 | minus nitrogen | 48hr | GSE51602 | | | |
| Chemical treatment | sta6 (CC4348) | minus nitrogen | 0hr | GSE51602 | | | |
| Chemical treatment | sta6 (CC4348) | minus nitrogen | 30min | GSE51602 | | | |
| Chemical treatment | sta6 (CC4348) | minus nitrogen | 2hr | GSE51602 | | | |
| Chemical treatment | sta6 (CC4348) | minus nitrogen | 4hr | GSE51602 | | | |
| Chemical treatment | sta6 (CC4348) | minus nitrogen | 8hr | GSE51602 | | | |
| Chemical treatment | sta6 (CC4348) | minus nitrogen | 12hr | GSE51602 | | | |
| Chemical treatment | sta6 (CC4348) | minus nitrogen | 24hr | GSE51602 | | | |
| Chemical treatment | sta6 (CC4348) | minus nitrogen | 48hr | GSE51602 | | | |
| Chemical treatment | STA6-C2 (CC4565) | minus nitrogen | 30min | GSE51602 | | | |
| Chemical treatment | STA6-C2 (CC4565) | minus nitrogen | 4hr | GSE51602 | | | |
| Chemical treatment | STA6-C2 (CC4565) | minus nitrogen | 48hr | GSE51602 | | | |
| Chemical treatment; Medium Type | CC4349 | minus nitrogen; HSM -ammonium | pre-wash | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | minus nitrogen; HSM -ammonium | 0hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | minus nitrogen; HSM -ammonium | 0.5hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | minus nitrogen; HSM -ammonium | 2hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | minus nitrogen; HSM -ammonium | 4hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | minus nitrogen; HSM -ammonium | 8hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | minus nitrogen; HSM -ammonium | 12hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | minus nitrogen; HSM -ammonium | 24hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | minus nitrogen; HSM -ammonium | 48hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | 48 h minus nitrogen, then acetate boost | 0hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | 48 h minus nitrogen, then acetate boost | 0.5hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | 48 h minus nitrogen, then acetate boost | 2hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | 48 h minus nitrogen, then acetate boost | 4hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | 48 h minus nitrogen, then acetate boost | 8hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | 48 h minus nitrogen, then acetate boost | 12hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | 48 h minus nitrogen, then acetate boost | 24hr | GSE55253 | | | |
| Chemical treatment; Medium Type | CC4349 | 48 h minus nitrogen, then acetate boost | 48hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | minus nitrogen; HSM -ammonium | pre-wash | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | minus nitrogen; HSM -ammonium | 0hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | minus nitrogen; HSM -ammonium | 0.5hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | minus nitrogen; HSM -ammonium | 2hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | minus nitrogen; HSM -ammonium | 4hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | minus nitrogen; HSM -ammonium | 8hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | minus nitrogen; HSM -ammonium | 12hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | minus nitrogen; HSM -ammonium | 24hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | minus nitrogen; HSM -ammonium | 48hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | 48 h minus nitrogen, then acetate boost | 0hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | 48 h minus nitrogen, then acetate boost | 0.5hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | 48 h minus nitrogen, then acetate boost | 2hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | 48 h minus nitrogen, then acetate boost | 4hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | 48 h minus nitrogen, then acetate boost | 8hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | 48 h minus nitrogen, then acetate boost | 12hr | GSE55253 | | | |
| Chemical treatment; Medium Type | sta6(CC4348) | 48 h minus nitrogen, then acetate boost | 48hr | GSE55253 | | | |
| Vitamin | A31 | vitamin B12 and thiamine | 0hr | GSE56295 | | | |
| Vitamin | A31 | vitamin B12 and thiamine | 12hr | GSE56295 | | | |
| Vitamin | A31 | vitamin B12 and thiamine | 48hr | GSE56295 | | | |
| Vitamin | DHC16 | vitamin B12 and thiamine | 0hr | GSE56295 | | | |
| Vitamin | DHC16 | vitamin B12 and thiamine | 12hr | GSE56295 | | | |
| Vitamin | DHC16 | vitamin B12 and thiamine | 48hr | GSE56295 | | | |
| Rapamycin | A31 | rapamycin | 0hr | GSE56295 | | | |
| Rapamycin | A31 | rapamycin | 12hr | GSE56295 | | | |
| Rapamycin | A31 | rapamycin | 48hr | GSE56295 | | | |
| Rapamycin | DHC16 | rapamycin | 0hr | GSE56295 | | | |
| Rapamycin | DHC16 | rapamycin | 12hr | GSE56295 | | | |
| Rapamycin | DHC16 | rapamycin | 48hr | GSE56295 | | | |
| Rapamycin | A31 | rapamycin | 2hr | GSE56295 | | | |
| Rapamycin | A31 | rapamycin | 8hr | GSE56295 | | | |
| Chemical treatment;Medium Type | CC1690 | TA + 1.1 mM phosphate (TAP) | | GSE56505 | | | |
| Chemical treatment;Medium Type | CC1690 | phosphate deprivation;TA media | | GSE56505 | | | |
| Chemical treatment | CC4532 | Zn replete | early phase | GSE58786 | | | |
| Chemical treatment | CC4532 | Zn replete | late phase | GSE58786 | | | |
| Chemical treatment | CC4532 | Zn deficient | 0hr | GSE58786 | | | |
| Chemical treatment | CC4532 | 2.5 µM Zn resupply | 1.5hr | GSE58786 | | | |
| Chemical treatment | CC4532 | 2.5 µM Zn resupply | 3hr | GSE58786 | | | |
| Chemical treatment | CC4532 | 2.5 µM Zn resupply | 4.5hr | GSE58786 | | | |
| Chemical treatment | CC4532 | 2.5 µM Zn resupply | 12hr | GSE58786 | | | |
| Chemical treatment | CC4532 | 2.5 µM Zn resupply | 24hr | GSE58786 | | | |
| Chemical treatment | 4Aplus | Nitrogen starvation | 0hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Nitrogen starvation | 10min | GSE59629 | | | |
| Chemical treatment | 4Aplus | Nitrogen starvation | 30min | GSE59629 | | | |
| Chemical treatment | 4Aplus | Nitrogen starvation | 1hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Nitrogen starvation | 2hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Nitrogen starvation | 6hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Nitrogen starvation | 8hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Nitrogen starvation | 24hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Nitrogen starvation | 48hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Sulfur starvation | 0hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Sulfur starvation | 10min | GSE59629 | | | |
| Chemical treatment | 4Aplus | Sulfur starvation | 30min | GSE59629 | | | |
| Chemical treatment | 4Aplus | Sulfur starvation | 1hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Sulfur starvation | 2hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Sulfur starvation | 6hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Sulfur starvation | 8hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Sulfur starvation | 24hr | GSE59629 | | | |
| Chemical treatment | 4Aplus | Sulfur starvation | 48hr | GSE59629 | | | |
| Light | dw15.1 | Zeitgeber Time; 12-h light/12-h dark; hours since last dawn | 0hr | GSE62671 | | | |
| Light | dw15.1 | Zeitgeber Time;12-h light/12-h dark;hours since last dawn | 3hr | GSE62671 | | | |
| Light | dw15.1 | Zeitgeber Time;12-h light/12-h dark;hours since last dawn | 6hr | GSE62671 | | | |
| Light | dw15.1 | Zeitgeber Time;12-h light/12-h dark;hours since last dawn | 9hr | GSE62671 | | | |
| Light | dw15.1 | Zeitgeber Time;12-h light/12-h dark;hours since last dawn | 12hr | GSE62671 | | | |
| Light | dw15.1 | Zeitgeber Time;12-h light/12-h dark,;hours since last dawn | 15hr | GSE62671 | | | |
| Light | dw15.1 | Zeitgeber Time;12-h light/12-h dark;hours since last dawn | 18hr | GSE62671 | | | |
| Light | dw15.1 | Zeitgeber Time;12-h light/12-h dark;hours since last dawn | 21hr | GSE62671 | | | |
| Light | CC1609 | light | | GSE62690 | | | |
| Chemical treatment | CPCC11 | no treatment | 2hr | GSE65109 | | | |
| Chemical treatment | CPCC11 | 0.1 µM Cu | 2hr | GSE65109 | | | |
| Chemical treatment | CPCC11 | 0.1 µM Hg | 2hr | GSE65109 | | | |
| Chemical treatment | CPCC11 | 1 nM Hg | 2hr | GSE65109 | | | |
| Chemical treatment | CPCC11 | 100 nM Hg | 2hr | GSE65109 | | | |
| Chemical treatment | CPCC11 | 0.05 nM CH3Hg | 2hr | GSE65109 | | | |
| Chemical treatment | CPCC11 | 0.5 nM CH3Hg | 2hr | GSE65109 | | | |
| Chemical treatment | CPCC11 | 5 nM CH3Hg | 2hr | GSE65109 | | | |
| Chemical treatment | CPCC11 | 50 nM CH3Hg | 2hr | GSE65109 | | | |
| UV-B | CC125 | UV-B | 0hr | GSE68739 | | | |
| UV-B | CC125 | UV-B | 1hr | GSE68739 | | | |
| Chemical treatment | CPCC11 | no treatment | 2hr | GSE70066 | | | |
| Chemical treatment | CPCC11 | 0.5 nM MeHg | 2hr | GSE70066 | | | |
| Chemical treatment | CPCC11 | 0.05 nM MeHg | 2hr | GSE70066 | | | |
| Light | 6145c (CC2895) | ZT1;12L:12D;light phase | 1hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT2;12L:12D;light phase | 2hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT3;12L:12D; light phase | 3hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT4;12L:12D; light phase | 4hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT5;12L:12D; light phase | 5hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT6;12L:12D; light phase | 6hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT7;12L:12D;light phase | 7hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT8;12L:12D; light phase | 8hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT9;12L:12D;light phase | 9hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT10;12L:12D;light phase | 10hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT11;12L:12D; light phase | 11hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT11.5;12L:12D; light phase | 11.5hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT12;12L:12D; light phase | 12hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT12.5;12L:12D;dark phase | 12.5hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT12.5;12L:12D;dark phase | 13hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT13.5;12L:12D;dark phase | 13.5hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT14;12L:12D;dark phase | 14hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT14.5;12L:12D; dark phase | 14.5 hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT15;12L:12D; dark phase | 15hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT16;12L:12D; dark phase | 16hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT17;12L:12D;dark phase | 17hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT18;12L:12D;dark phase | 18hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT19;12L:12D;dark phase | 19hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT20;12L:12D;dark phase | 20hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT21;12L:12D;dark phase | 21hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT22;12L:12D;dark phase | 22hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT23;12L:12D;dark phase | 23hr | GSE71469 | | | |
| Light | 6145c (CC2895) | ZT24;12L:12D;dark phase | 24hr | GSE71469 | | | |
| Light;Chemical treatment;Gene mutant | 4Aplus | 4hr light;0mM BV Ixalpha;WT | 4hr | GSE77388 | | | |
| Light;Chemical treatment;Gene mutant | 4Aplus | 4hr light;0.1mM BV Ixalpha;WT | 4hr | GSE77388 | | | |
| Light;Chemical treatment;Gene mutant | hmox1 | 4hr light;0mM BV Ixalpha;hmox1 mutant | 4hr | GSE77388 | | | |
| Light;Chemical treatment;Gene mutant | hmox1 | 4hr light;0.1mM BV Ixalpha;hmox1 mutant | 4hr | GSE77388 | | | |
| Light;Chemical treatment;Gene mutant | ho1C1 | dark;0mM BV Ixalpha;complemented hmox1 lines(ho1C1) | 0hr | GSE77388 | | | |
| Light;Chemical treatment;Gene mutant | ho1C1 | light;0mM BV Ixalpha;complemented hmox1 lines(ho1C1) | 30min | GSE77388 | | | |
| Light;Chemical treatment;Gene mutant | ho1C1 | light;0mM BV Ixalpha;complemented hmox1 lines(ho1C1) | 4hr | GSE77388 | | | |
| Light;Chemical treatment;Gene mutant | ho1C2 | dark;0mM BV Ixalpha;complemented hmox1 lines (ho1C2) | 0hr | GSE77388 | | | |
| Light;Chemical treatment;Gene mutant | ho1C2 | light;0mM BV Ixalpha;complemented hmox1 lines (ho1C2) | 30min | GSE77388 | | | |
| Light;Chemical treatment;Gene mutant | ho1C2 | light;0mM BV Ixalpha;complemented hmox1 lines (ho1C2) | 4hr | GSE77388 | | | |
| Exposure | | control in closed SUBS; filtered Valcea Reservoir water; Olt River upstream of the Hg-polluting factory | 2hr | GSE84995 | | | |
| Exposure | | in situ exposure at the Babeni Reservoir Site 1; Olt River downstream of the Hg-polluting factory (Hg-impacted) | 2hr | GSE84995 | | | |
| Exposure | | in situ exposure at the Babeni Reservoir Site 2; Olt River downstream of the Hg-polluting factory (Hg-impacted) | 2hr | GSE84995 | | | |
| Chemical treatment | 6145c | 10 mM nitrite; grown in darkness | 15min | GSE90609 | | | |
| Chemical treatment | 6145c | 10 mM nitrite; grown in darkness | 24hr | GSE90609 | | | |
| Chemical treatment | 6145c | 10 mM nitrite; grown in darkness | 3hr | GSE90609 | | | |
| Chemical treatment | 6145c | 0 mM nitrite; grown in darkness | 15min | GSE90609 | | | |
| Chemical treatment | 6145c | 0 mM nitrite; grown in darkness | 24hr | GSE90609 | | | |
| Chemical treatment | 6145c | 0 mM nitrite; grown in darkness | 3hr | GSE90609 | | | |
| Growth/Developmental Stage | JL-I2-152 | vegetative growth | | GSE91400 | | | |
| Growth/Developmental Stage | JL-I2-152 | cell wall regeneration | | GSE91400 | | | |
| Growth/Developmental Stage | JL-M2MP-10 | pseudo-zygote stage | | GSE91400 | | | |
| Growth/Developmental Stage | JL-M2MP-110 | pseudo-zygote stage | | GSE91400 | | | |
| Growth/Developmental Stage | CC-125 x CC-2342 | zygote stage | | GSE91400 | | | |
| Growth/Developmental Stage | CC-2937 x CC-621 | zygote stage | | GSE91400 | | | |
| Growth/Developmental Stage | JL-R9-53 | vegetative growth stage | | GSE91400 | | | |
| Growth/Developmental Stage | JL-R9-53 | cell wall regeneration | | GSE91400 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | light; aerobic; standard; WT | | GSE98442 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; aerobic; WT | | GSE98442 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; anoxic; WT | | GSE98442 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | light; aerobic; standard; CYG12 knockdown | | GSE98442 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; aerobic; CYG12 knockdown | | GSE98442 | | | |
| Light; Oxygen availability; Gene mutant | CC124 | dark; anoxic; CYG12 knockdown | | GSE98442 | | | |
| Chemical treatment | CC124 | no treatment | 0hr | PRJDB11350 | | | |
| Chemical treatment | CC124 | no treatment | 3hr | PRJDB11350 | | | |
| Chemical treatment | CC124 | no treatment | 6hr | PRJDB11350 | | | |
| Chemical treatment | CC124 | no treatment | 24hr | PRJDB11350 | | | |
| Chemical treatment | CC124 | LPS | 3hr | PRJDB11350 | | | |
| Chemical treatment | CC124 | LPS | 6hr | PRJDB11350 | | | |
| Chemical treatment | CC124 | LPS | 24hr | PRJDB11350 | | | |
| Chemical treatment; Gene mutant | C9 (WT) | nitrogen sufficient; WT_x000D_ | 6hr | PRJDB3021 | | | |
| Chemical treatment; Gene mutant | C9 (WT) | nitrogen starvation; WT | 6hr | PRJDB3021 | | | |
| Chemical treatment; Gene mutant | C9 (WT) | sulfur starvation; WT | 6hr | PRJDB3021 | | | |
| Chemical treatment; Gene mutant | C9 (tar1-1 mutant) | nitrogen sufficient; tar1-1 mutant | 6hr | PRJDB3021 | | | |
| Chemical treatment; Gene mutant | C9 (tar1-1 mutant) | nitrogen starvation; tar1-1 mutant | 6hr | PRJDB3021 | | | |
| Chemical treatment; Gene mutant | C9 (tar1-1 mutant) | sulfur starvation; tar1-1 mutant | 6hr | PRJDB3021 | | | |
| Chemical treatment; Gene mutant | C9 (tar1-1C1) | nitrogen sufficient; tar1-1C complemented | 6hr | PRJDB3021 | | | |
| Chemical treatment; Gene mutant | C9 (tar1-1C1) | nitrogen starvation; tar1-1C1 complemented | 6hr | PRJDB3021 | | | |
| CO2 | 5D (WT) | high CO2 (5%) | 20min | PRJDB4017 | | | |
| CO2 | 5D (WT) | high CO2 (5%) | 4hr | PRJDB4017 | | | |
| CO2 | 5D (WT) | high CO2 (5%) to low CO2 (0.04%) | 20min | PRJDB4017 | | | |
| CO2 | 5D (WT) | high CO2 (5%) to low CO2 (0.04%) | 4hr | PRJDB4017 | | | |
| CO2 | 5D (WT) | low CO2 (0.04%) to high CO2 (5%) | 20min | PRJDB4017 | | | |
| CO2 | 5D (WT) | low CO2 (0.04%) to high CO2 (5%) | 4hr | PRJDB4017 | | | |
| CO2 | 5D (WT) | high CO2 (5%) to very low CO2 (0.01%) | 1hr | PRJDB4017 | | | |
| CO2 | 5D (WT) | high CO2 (5%) to very low CO2 (0.01%) | 20min | PRJDB4017 | | | |
| CO2 | 5D (WT) | high CO2 (5%) to very low CO2 (0.01%) | 2hr | PRJDB4017 | | | |
| CO2 | 5D (WT) | continuously very low CO2 (0.04%) | | PRJDB4017 | | | |
| CO2 | C16 (CCM1-deficient mutant) | high CO2 (5%) to low CO2 (0.04%); CCM1-deficient mutant | 20min | PRJDB4017 | | | |
| CO2 | C16 (CCM1-deficient mutant) | high CO2 (5%) to low CO2 (0.04%); CCM1-deficient mutant | 4hr | PRJDB4017 | | | |
| CO2 | C16 (CCM1-deficient mutant) | low CO2 (0.04%) to high CO2 (5%) | 20min | PRJDB4017 | | | |
| CO2 | C16 (CCM1-deficient mutant) | continuously high CO2 (5%) | | PRJDB4017 | | | |
| CO2 | XA-FLAG (complemented strain of CCM1-deficient) | high CO2 (5%) to low CO2 (0.04%) | 20min | PRJDB4017 | | | |
| CO2 | XA-FLAG (complemented strain of CCM1-deficient) | high CO2 (5%) to low CO2 (0.04%) | 4hr | PRJDB4017 | | | |
| CO2 | XA-FLAG (complemented strain of CCM1-deficient) | low CO2 (0.04%) to high CO2 (5%) | 20min | PRJDB4017 | | | |
| CO2 | XA-FLAG (complemented strain of CCM1-deficient) | continuously high CO2 (5%) | | PRJDB4017 | | | |
| CO2; Light | C9 (WT) | medium CO2 (1.2%); high light | 4hr | PRJDB4017 | | | |
| CO2 | KI6-5 (complemented strain of CCM1-deficient) | high CO2 (5%) to low CO2 (0.04%) | 20min | PRJDB4017 | | | |
| CO2 | KI6-5 (complemented strain of CCM1-deficient) | high CO2 (5%) to low CO2 (0.04%) | 4hr | PRJDB4017 | | | |
| CO2 | KI6-5 (complemented strain of CCM1-deficient) | continuously high CO2 (5%) | | PRJDB4017 | | | |
| CO2 | pKI4 (complemented strain of CCM1-deficient) | high CO2 (5%) to low CO2 (0.04%) | 20min | PRJDB4017 | | | |
| CO2 | pKI4 (complemented strain of CCM1-deficient) | high CO2 (5%) to low CO2 (0.04%) | 4hr | PRJDB4017 | | | |
| CO2 | pKI4 (complemented strain of CCM1-deficient) | continuously high CO2 (5%) | | PRJDB4017 | | | |
| CO2 | pKI4 (complemented strain of CCM1-deficient) | low CO2 (0.04%) to high CO2 (5%) | 20min | PRJDB4017 | | | |
| Gene mutant; CO2; Chemical treatment | C9 (WT) | WT; high CO2 (5%); nitrogen-sufficient | | PRJDB4749 | | | |
| Gene mutant; CO2; Chemical treatment | C9 (WT) | WT; high CO2(5%); nitrogen-starvation | | PRJDB4749 | | | |
| Gene mutant; CO2; Chemical treatment | C9 (tar1-1) | tar1-1 mutant; high CO2 (5%); nitrogen-starvation | | PRJDB4749 | | | |
| Chemical treatment; Gene mutant | C9 (lrr1-1) | phosphate-starvation; lrr1-1 mutant | 2d | PRJDB6733 | | | |
| Chemical treatment; Gene mutant | C9 (lrr1-1) | phosphate-starvation; lrr1-1 mutant | 4d | PRJDB6733 | | | |
| Chemical treatment; Gene mutant | C9 (lrr1-1) | phosphate-sufficient; lrr1-1 mutant | 4d | PRJDB6733 | | | |
| Chemical treatment; Gene mutant | C9 (vector control) | phosphate-starvation; vector control | 2d | PRJDB6733 | | | |
| Chemical treatment; Gene mutant | C9 (vector control) | phosphate-sufficient; vector control | 4d | PRJDB6733 | | | |
| Chemical treatment; Gene mutant | C9 (vector control) | phosphate-starvation; vector control | 4d | PRJDB6733 | | | |
| Chemical treatment | CC124 | phosphate starvation | 8d | PRJDB6733 | | | |
| Chemical treatment | CC124 | phosphate starvation | 13d | PRJDB6733 | | | |
| Chemical treatment | CC124 | phosphate sufficient | 8d | PRJDB6733 | | | |
| Chemical treatment | CC124 | phosphate sufficient | 13d | PRJDB6733 | | | |
| Chemical treatment | CC125 | phosphate sufficient | 13d | PRJDB6733 | | | |
| Chemical treatment | CC125 | phosphate starvation | 13d | PRJDB6733 | | | |
| Chemical treatment | CC4334 | phosphate starvation | 8d | PRJDB6733 | | | |
| Chemical treatment | CC4334 | phosphate starvation | 13d | PRJDB6733 | | | |
| Chemical treatment | CC4334 | phosphate sufficient | 8d | PRJDB6733 | | | |
| Chemical treatment | CC4334 | phosphate sufficient | 13d | PRJDB6733 | | | |
| Chemical treatment | CW15 | phosphate starvation | 8d | PRJDB6733 | | | |
| Chemical treatment | CW15 | phosphate starvation | 13d | PRJDB6733 | | | |
| Chemical treatment | CW15 | phosphate sufficient | 8d | PRJDB6733 | | | |
| Chemical treatment | CW15 | phosphate sufficient | 13d | PRJDB6733 | | | |
| Growth/Developmental Stage; Chemical treatment | 6145c (CC-1691) | Minus gametic cells; activated (db-cAMP, 1hr) | 1hr | PRJEB1053 | | | |
| Growth/Developmental Stage; Chemical treatment | 21gr (CC-1690) | Plus gametic cells; activated (db-cAMP, 1hr) | 1hr | PRJEB1053 | | | |
| Growth/Developmental Stage; Chemical treatment | 6145c (CC-1691) | Minus gametic cells; lysin-treated (1 hr) | 1hr | PRJEB1053 | | | |
| Growth/Developmental Stage; Chemical treatment | 21gr (CC-1690) | Plus gametic cells; lysin-treated (1 hr) | 1hr | PRJEB1053 | | | |
| Growth/Developmental Stage | 6145c (CC-1691) | Minus gametic cells; no treatment | | PRJEB1053 | | | |
| Growth/Developmental Stage | 21gr (CC-1690) | Plus gametic cells; no treatment | | PRJEB1053 | | | |
| Growth/Developmental Stage | not mentioned | vegetative; synchronized | | PRJEB1053 | | | |
| Growth/Developmental Stage | not mentioned | vegetative; unsynchronized | | PRJEB1053 | | | |
| Chemical treatment | npq4 | sulfur deficiency | 0hr | PRJEB3352 | | | |
| Chemical treatment | npq4 | sulfur deficiency | 96hr | PRJEB3352 | | | |
| Chemical treatment | npq4 | sulfur deficiency | 72hr | PRJEB3352 | | | |
| Chemical treatment | CW15 | nitrogen starvation; control | 0hr | PRJNA230995 | | | |
| Chemical treatment | CW15 | nitrogen starvation | 1hr | PRJNA230995 | | | |
| Chemical treatment | CW15 | nitrogen starvation | 2hr | PRJNA230995 | | | |
| Chemical treatment | CW15 | nitrogen starvation | 4hr | PRJNA230995 | | | |
| Chemical treatment | CW15 | nitrogen starvation | 6hr | PRJNA230995 | | | |
| Chemical treatment | CW15 | nitrogen starvation | 12hr | PRJNA230995 | | | |
| Chemical treatment | CW15 | nitrogen starvation | 24hr | PRJNA230995 | | | |
| Chemical treatment | CW15 | nitrogen starvation | 30min | PRJNA230995 | | | |
| Others | CC-503 (cw92) | experimental evolution; continuous light; serial dilution | | PRJNA238086 | | | |
| Gene mutant;Chemical treatment | dw15 (WT) | WT; Nitrogen replete | | PRJNA241455 | | | |
| Gene mutant;Chemical treatment | dw15 (WT) | WT; Nitrogen deprived | | PRJNA241455 | | | |
| Gene mutant;Chemical treatment | dw15 (WT) | WT; Nitrogen resupplied | 6hr | PRJNA241455 | | | |
| Gene mutant;Chemical treatment | dw15 (WT) | WT; Nitrogen resupplied | 12hr | PRJNA241455 | | | |
| Gene mutant; Chemical treatment | dw15 (cht7) | cht7 mutant; Nitrogen replete | | PRJNA241455 | | | |
| Gene mutant; Chemical treatment | dw15 (cht7) | cht7 mutant; Nitrogen deprived | | PRJNA241455 | | | |
| Gene mutant; Chemical treatment | dw15 (cht7) | cht7 mutant; Nitrogen resupplied | 6hr | PRJNA241455 | | | |
| Gene mutant; Chemical treatment | dw15 (cht7) | cht7 mutant; Nitrogen resupplied | 12hr | PRJNA241455 | | | |
| Growth/Developmental Stage | CJU10xR3 (zygote) | zygotic stage | | PRJNA285347 | | | |
| Growth/Developmental Stage | CJU10 (mt-) | vegetative stage | | PRJNA285347 | | | |
| Growth/Developmental Stage | CJU10 (mt-) | gamete stage | | PRJNA285347 | | | |
| Growth/Developmental Stage | R3 (mt+) | vegetative stage | | PRJNA285347 | | | |
| Growth/Developmental Stage | R3 (mt+) | gamete stage | | PRJNA285347 | | | |
| Chemical treatment | CC125 | control (DMSO vehicle); nitrogen-replete | 72hr | PRJNA324451 | | | |
| Chemical treatment | CC125 | 10 µM WD10784-treated (small molecule); nitrogen-replete | 72hr | PRJNA324451 | | | |
| Chemical treatment | CC125 | 30 µM WD20542-treated (small molecule); nitrogen-replete | 72hr | PRJNA324451 | | | |
| Chemical treatment | CC125 | 30 µM WD30030-treated (small molecule); nitrogen-replete | 72hr | PRJNA324451 | | | |
| Gene mutant | CC503 | HCD1 mutant; log phase; under continuous light; 2% CO2 | 2 days | PRJNA353145 | | | |
| Gene mutant | CC503 | HCD3 mutant; log phase; under continuous light; 2% CO2 | 2 days | PRJNA353145 | | | |
| Gene mutant | CC503 | WT; log phase; under continuous light; 2% CO2 | 2 days | PRJNA353145 | | | |
| Temperature | CC-503 mt+ | 30°C | | PRJNA412529 | | | |
| Temperature | CC-503 mt+ | 20°C | | PRJNA412529 | | | |
| Medium Type; Light; Gene mutant | 137C | agar; light; WT | | PRJNA432659 | | | |
| Medium Type; Light; Gene mutant | 137C | agar; light; WT | | PRJNA432659 | | | |
| Medium Type; Light; Gene mutant | iclC (137C background) | liquid; light; iclC mutant | | PRJNA432659 | | | |
| Gene mutant | 137C (icl complemented) | icl complemented | T0 | PRJNA43739 | | | |
| Gene mutant | 137C (icl complemented) | icl complemented | T4 | PRJNA43739 | | | |
| Gene mutant | 137C (icl complemented) | icl complemented | T8 | PRJNA43739 | | | |
| Gene mutant | 137C (icl complemented) | icl complemented | T12 | PRJNA43739 | | | |
| Gene mutant | 137C (icl complemented) | icl complemented | T16 | PRJNA43739 | | | |
| Gene mutant | 137C (icl complemented) | icl complemented | T20 | PRJNA43739 | | | |
| Gene mutant | 137C (icl complemented) | icl complemented | T24 | PRJNA43739 | | | |
| Gene mutant | 137C (icl complemented) | icl complemented | T28 | PRJNA43739 | | | |
| Gene mutant | 137C (null-mutant) | icl null-mutant | T0 | PRJNA43739 | | | |
| Gene mutant | 137C (null-mutant) | icl null-mutant | T12 | PRJNA43739 | | | |
| Gene mutant | 137C (null-mutant) | icl null-mutant | T16 | PRJNA43739 | | | |
| Gene mutant | 137C (null-mutant) | icl null-mutant | T20 | PRJNA43739 | | | |
| Gene mutant | 137C (null-mutant) | icl null-mutant | T24 | PRJNA43739 | | | |
| Gene mutant | 137C (null-mutant) | icl null-mutant | T28 | PRJNA43739 | | | |
| Gene mutant | 137C (null-mutant) | icl null-mutant | T4 | PRJNA43739 | | | |
| Gene mutant | 137C (null-mutant) | icl null-mutant | T8 | PRJNA43739 | | | |
| Growth/Developmental Stage | CC125 | time course; culture time 3 hr | 3hr | PRJNA479583 | | | |
| Growth/Developmental Stage | CC125 | time course; culture time 6 hr | 6hr | PRJNA479583 | | | |
| Growth/Developmental Stage | CC125 | time course; culture time 9 hr | 9hr | PRJNA479583 | | | |
| Growth/Developmental Stage | CC125 | time course; culture time 12 hr | 12hr | PRJNA479583 | | | |
| Growth/Developmental Stage | CC125 | time course; culture time 48 hr | 48hr | PRJNA479583 | | | |
| Growth/Developmental Stage | WRC01 | time course; culture time 3hr | 3hr | PRJNA479583 | | | |
| Growth/Developmental Stage | WRC01 | time course; culture time 6 hr | 6hr | PRJNA479583 | | | |
| Growth/Developmental Stage | WRC01 | time course; culture time 9 hr | 9hr | PRJNA479583 | | | |
| Growth/Developmental Stage | WRC01 | Stage time course; culture time 12 hr | 12hr | PRJNA479583 | | | |
| Growth/Developmental Stage | WRC01 | Stage time course; culture time 48 hr | 48hr | PRJNA479583 | | | |
| Gene mutant; Light | | WT; high light exposure | 40min | PRJNA488111 | | | |
| Gene mutant; Light | | Mars1 mutant; high light exposure | 70min | PRJNA488111 | | | |
| Gene mutant; Light | | WT; high light exposure | 70min | PRJNA488111 | | | |
| Gene mutant | | Mars1 mutant; untreated | | PRJNA488111 | | | |
| Gene mutant | | WT; untreated | | PRJNA488111 | | | |
| Gene mutant; ClpP Treatment | | Mars1 mutant; ClpP treatment | | PRJNA488111 | | | |
| Gene mutant; ClpP Treatment | | WT; ClpP treatment | | PRJNA488111 | | | |
| Gene mutant;Light | | Mars1 mutant; 40 min high light | 40min | PRJNA488111 | | | |
| Light | SCCAP K-1017 | dark | | PRJNA509798 | | | |
| Light | SCCAP K-1017 | light (control) | | PRJNA509798 | | | |
| Chemical treatment | CC-503 cw903 mt plus | low lead | day 3 | PRJNA576974 | | | |
| Chemical treatment | CC-503 cw903 mt plus | no lead | day 3 | PRJNA576974 | | | |
| Chemical treatment | CC-503 cw903 mt plus | high lead | day 3 | PRJNA576974 | | | |
| Chemical treatment | CrP4 EV | Nitrogen depletion | 0hr | PRJNA587114 | | | |
| Chemical treatment | CrP4 EV | Nitrogen depletion | 3hr | PRJNA587114 | | | |
| Chemical treatment | CrP4 EV | Nitrogen depletion | 12hr | PRJNA587114 | | | |
| Chemical treatment | CrLPAAT1 OE 6-4 | Nitrogen depletion | 0hr | PRJNA587114 | | | |
| Chemical treatment | CrLPAAT1 OE 6-4 | Nitrogen depletion | 3hr | PRJNA587114 | | | |
| Chemical treatment | CrLPAAT1 OE 6-4 | Nitrogen depletion | 12hr | PRJNA587114 | | | |
| Chemical treatment | CrLPAAT1 OE 12-2 | Nitrogen depletion | 0hr | PRJNA587114 | | | |
| Chemical treatment | CrLPAAT1 OE 12-2 | Nitrogen depletion | 3hr | PRJNA587114 | | | |
| Chemical treatment | CrLPAAT1 OE 12-2 | Nitrogen depletion | 12hr | PRJNA587114 | | | |
| Medium Type | HCD10 | TAP | 2days | PRJNA593684 | | | |
| Medium Type | CC503 | TAP | 2days | PRJNA593684 | | | |
| Light; Gene mutant | CC124/WT | moderate high light; WT | 30 min | PRJNA596622 | | | |
| Light; Gene mutant | CC124/WT | dark;WT | 8 hr | PRJNA596622 | | | |
| Light; Gene mutant | CC124/hit1 mutant | moderate high light; hit1 mutation | 30min | PRJNA596622 | | | |
| Light; Gene mutant | CC124/hit1 mutant | dark; hit1 mutation | 8hr | PRJNA596622 | | | |
| Gene mutant; Time course | CC-400 cw15 mt+ | E3 mutation; Time course | 0 hr | PRJNA706126 | | | |
| Gene mutant; Time course | CC-400 cw15 mt+ | E3 mutation; Time course | 15 min | PRJNA706126 | | | |
| Gene mutant; Time course | CC-400 cw15 mt+ | E3 mutation | 2 hr | PRJNA706126 | | | |
| Gene mutant; Time course | CC-400 cw15 mt+ | WT | 0 hr | PRJNA706126 | | | |
| Gene mutant; Time course | CC-400 cw15 mt+ | WT | 15 min | PRJNA706126 | | | |
| Gene mutant; Time course | CC-400 cw15 mt+ | WT | 2 hr | PRJNA706126 | | | |
| CO2 | CC125 | 20% CO2 exposure | 1-day | PRJNA720171 | | | |
| Chemical treatment | CC125 | acidic conditions (pH 5.0) | 1-day | PRJNA720171 | | | |
| Chemical treatment | CC125 | no treatment | 1-day | PRJNA720171 | | | |
| Gene mutant | CC125 | radiation Mutant | 5 day | PRJNA738545 | | | |
| Gene mutant | CC125 | Mutant | 5 day | PRJNA738545 | | | |
| Gene mutant | CC125 | WT | 5 day | PRJNA738545 | | | |