Gene informations
Gene ID
Cre01.g002800.t1.3
Length
Transcrpit length: 14029 nt; Peptide length: 4347 a.a.
Sequence
Transcript sequence
;
Peptide sequence
Gene definition
Scavenger receptor cysteine rich (SRCR) protein
Coexpressionanalysis
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ID
Name
NCBI KOG
KOG2806
Chitinase
PANTHER
PTHR11177
CHITINASE
ID
Name
Description or definition
Pfam
PF00530 PF00704 PF00059 PF03762
SRCR Glyco_hydro_18 Lectin_C VOMI
Scavenger receptor cysteine-rich domain Glycosyl hydrolases family 18 Lectin C-type domain Vitelline membrane outer layer protein I (VOMI)
Best hit from Arabidopsis Thaliana
AT4G19800.1
(none)
Glycosyl hydrolase family protein with chitinase insertion domain
User can select interesting condition and view the transcript abundance level on next page.
Sulfur deplete
GSE17970_GSM449827, control, wild type (Solexa)
GSE17970_GSM449829, control, SNRK2.1 mutant (Solexa)
GSE17970_GSM449828, Treatment, wild type (Solexa)
GSE17970_GSM449830, Treatment, SNRK2.1 mutant (Solexa)
Nitrogen deprivation
GSE24367_GSM600876, control #1 (Solexa)
GSE24367_GSM600877, control #2 (Solexa)
GSE24367_GSM600878, control #3 (Solexa)
GSE24367_GSM600882, control #4 (Roche)
GSE24367_GSM600879, Treatment #1 (Solexa)
GSE24367_GSM600880, Treatment #2 (Solexa)
GSE24367_GSM600881, Treatment #3 (Solexa)
GSE24367_GSM600883, Treatment #4 (Roche)
Revised trace element recipe
GSE25622_GSM629579, Treatment #1 (Solexa)
GSE25622_GSM629580, Treatment #2 (Solexa)
CO2 concentration
GSE33927_GSM838877, Chlamydomonas sp. 137c, low CO2 concentration (Solexa)
GSE33927_GSM838878, Chlamydomonas sp. 137c, high CO2 concentration (Solexa)
GSE33927_GSM838879, Chlamydomonas sp. 137c, very low CO2 concentration (Solexa)
GSE33927_GSM838880, Chlamydomonas sp. 137c (cia5 mutant), low CO2 concentration (Solexa)
GSE33927_GSM838881, Chlamydomonas sp. 137c (cia5 mutant), high CO2 concentration (Solexa)
GSE33927_GSM838882, Chlamydomonas sp. 137c (cia5 mutant), very low CO2 concentration (Solexa)
Oxidative stress
GSE33548_GSM829700, Singlet oxygen-mediated stress, wild type (Solexa)
GSE33548_GSM829701, Singlet oxygen-mediated stress, mutant (Solexa)
GSE34826_GSM855971, Hydrogen peroxide stress, control (Solexa)
GSE34826_GSM855972, Hydrogen peroxide stress, treatment (Solexa)
GSE34826_GSM855973, Hydrogen peroxide stress, treatment (Solexa)
Fe deprivation
TAP media
GSE35305_GSM865537, Fe repletion #1 (control) (Solexa)
GSE35305_GSM865538, Fe repletion #2 (control) (Solexa)
GSE35305_GSM865539, Fe deficient #1 (Solexa)
GSE35305_GSM865540, Fe deficient #2 (Solexa)
GSE35305_GSM865541, Fe deficient #3 (Solexa)
GSE35305_GSM865542, Fe limitation #1 (Solexa)
GSE35305_GSM865543, Fe limitation #2 (Solexa)
GSE35305_GSM865544, Fe limitation #3 (Solexa)
Minimal media
GSE35305_GSM865545, Fe repletion #1 (control) (Solexa)
GSE35305_GSM865546, Fe repletion #2 (control) (Solexa)
GSE35305_GSM865547, Fe repletion #3 (control) (Solexa)
GSE35305_GSM865548, Fe repletion #4 (control) (Solexa)
GSE35305_GSM865549, Fe deficient #1 (Solexa)
GSE35305_GSM865550, Fe deficient #2 (Solexa)
GSE35305_GSM865551, Fe deficient #3 (Solexa)
GSE35305_GSM865552, Fe deficient #4 (Solexa)
GSE35305_GSM865553, Fe limitation #1 (Solexa)
GSE35305_GSM865554, Fe limitation #2 (Solexa)
GSE35305_GSM865555, Fe limitation #3 (Solexa)
GSE35305_GSM865556, Fe limitation #4 (Solexa)
