Gene informations
Gene ID
Cre01.g002200.t1.2
Length
Transcrpit length: 1182 nt; Peptide length: 133 a.a.
Sequence
Transcript sequence
;
Peptide sequence
Gene definition
Subunit of DNA-directed RNA polymerase
Coexpressionanalysis
Click
ID
Name
NCBI KOG
KOG3405
RNA polymerase subunit K
KEGG pathway
map00230 map00240 map01100 map03020 map04623
Purine metabolism Pyrimidine metabolism Metabolic pathways RNA polymerase Cytosolic DNA-sensing pathway
PANTHER
PTHR10773
DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
ID
Name
Description or definition
KEGG ortholog
K03014
RPB6, POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2
Pfam
PF01192
RNA_pol_Rpb6
RNA polymerase Rpb6
Best hit from Arabidopsis Thaliana
AT5G51940.1
NRPB6A,NRPD6A,NRPE6A
RNA polymerase Rpb6
User can select interesting condition and view the transcript abundance level on next page.
Sulfur deplete
GSE17970_GSM449827, control, wild type (Solexa)
GSE17970_GSM449829, control, SNRK2.1 mutant (Solexa)
GSE17970_GSM449828, Treatment, wild type (Solexa)
GSE17970_GSM449830, Treatment, SNRK2.1 mutant (Solexa)
Nitrogen deprivation
GSE24367_GSM600876, control #1 (Solexa)
GSE24367_GSM600877, control #2 (Solexa)
GSE24367_GSM600878, control #3 (Solexa)
GSE24367_GSM600882, control #4 (Roche)
GSE24367_GSM600879, Treatment #1 (Solexa)
GSE24367_GSM600880, Treatment #2 (Solexa)
GSE24367_GSM600881, Treatment #3 (Solexa)
GSE24367_GSM600883, Treatment #4 (Roche)
Revised trace element recipe
GSE25622_GSM629579, Treatment #1 (Solexa)
GSE25622_GSM629580, Treatment #2 (Solexa)
CO2 concentration
GSE33927_GSM838877, Chlamydomonas sp. 137c, low CO2 concentration (Solexa)
GSE33927_GSM838878, Chlamydomonas sp. 137c, high CO2 concentration (Solexa)
GSE33927_GSM838879, Chlamydomonas sp. 137c, very low CO2 concentration (Solexa)
GSE33927_GSM838880, Chlamydomonas sp. 137c (cia5 mutant), low CO2 concentration (Solexa)
GSE33927_GSM838881, Chlamydomonas sp. 137c (cia5 mutant), high CO2 concentration (Solexa)
GSE33927_GSM838882, Chlamydomonas sp. 137c (cia5 mutant), very low CO2 concentration (Solexa)
Oxidative stress
GSE33548_GSM829700, Singlet oxygen-mediated stress, wild type (Solexa)
GSE33548_GSM829701, Singlet oxygen-mediated stress, mutant (Solexa)
GSE34826_GSM855971, Hydrogen peroxide stress, control (Solexa)
GSE34826_GSM855972, Hydrogen peroxide stress, treatment (Solexa)
GSE34826_GSM855973, Hydrogen peroxide stress, treatment (Solexa)
Fe deprivation
TAP media
GSE35305_GSM865537, Fe repletion #1 (control) (Solexa)
GSE35305_GSM865538, Fe repletion #2 (control) (Solexa)
GSE35305_GSM865539, Fe deficient #1 (Solexa)
GSE35305_GSM865540, Fe deficient #2 (Solexa)
GSE35305_GSM865541, Fe deficient #3 (Solexa)
GSE35305_GSM865542, Fe limitation #1 (Solexa)
GSE35305_GSM865543, Fe limitation #2 (Solexa)
GSE35305_GSM865544, Fe limitation #3 (Solexa)
Minimal media
GSE35305_GSM865545, Fe repletion #1 (control) (Solexa)
GSE35305_GSM865546, Fe repletion #2 (control) (Solexa)
GSE35305_GSM865547, Fe repletion #3 (control) (Solexa)
GSE35305_GSM865548, Fe repletion #4 (control) (Solexa)
GSE35305_GSM865549, Fe deficient #1 (Solexa)
GSE35305_GSM865550, Fe deficient #2 (Solexa)
GSE35305_GSM865551, Fe deficient #3 (Solexa)
GSE35305_GSM865552, Fe deficient #4 (Solexa)
GSE35305_GSM865553, Fe limitation #1 (Solexa)
GSE35305_GSM865554, Fe limitation #2 (Solexa)
GSE35305_GSM865555, Fe limitation #3 (Solexa)
GSE35305_GSM865556, Fe limitation #4 (Solexa)
