Gene informations
Gene ID
Cre01.g001350.t1.2
Length
Transcrpit length: 3203 nt; Peptide length: 819 a.a.
Sequence
Transcript sequence
;
Peptide sequence
Gene definition
(none definition)
Coexpressionanalysis
Click
ID
Name
NCBI KOG
KOG0060
Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis)
PANTHER
PTHR11384
ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER
ID
Name
Description or definition
Pfam
PF06472 PF05992 PF00005
ABC_membrane_2 SbmA_BacA ABC_tran
ABC transporter transmembrane region 2 SbmA/BacA-like family ABC transporter
Best hit from Arabidopsis Thaliana
AT1G54350.1
(none)
ABC transporter family protein
User can select interesting condition and view the transcript abundance level on next page.
Sulfur deplete
GSE17970_GSM449827, control, wild type (Solexa)
GSE17970_GSM449829, control, SNRK2.1 mutant (Solexa)
GSE17970_GSM449828, Treatment, wild type (Solexa)
GSE17970_GSM449830, Treatment, SNRK2.1 mutant (Solexa)
Nitrogen deprivation
GSE24367_GSM600876, control #1 (Solexa)
GSE24367_GSM600877, control #2 (Solexa)
GSE24367_GSM600878, control #3 (Solexa)
GSE24367_GSM600882, control #4 (Roche)
GSE24367_GSM600879, Treatment #1 (Solexa)
GSE24367_GSM600880, Treatment #2 (Solexa)
GSE24367_GSM600881, Treatment #3 (Solexa)
GSE24367_GSM600883, Treatment #4 (Roche)
Revised trace element recipe
GSE25622_GSM629579, Treatment #1 (Solexa)
GSE25622_GSM629580, Treatment #2 (Solexa)
CO2 concentration
GSE33927_GSM838877, Chlamydomonas sp. 137c, low CO2 concentration (Solexa)
GSE33927_GSM838878, Chlamydomonas sp. 137c, high CO2 concentration (Solexa)
GSE33927_GSM838879, Chlamydomonas sp. 137c, very low CO2 concentration (Solexa)
GSE33927_GSM838880, Chlamydomonas sp. 137c (cia5 mutant), low CO2 concentration (Solexa)
GSE33927_GSM838881, Chlamydomonas sp. 137c (cia5 mutant), high CO2 concentration (Solexa)
GSE33927_GSM838882, Chlamydomonas sp. 137c (cia5 mutant), very low CO2 concentration (Solexa)
Oxidative stress
GSE33548_GSM829700, Singlet oxygen-mediated stress, wild type (Solexa)
GSE33548_GSM829701, Singlet oxygen-mediated stress, mutant (Solexa)
GSE34826_GSM855971, Hydrogen peroxide stress, control (Solexa)
GSE34826_GSM855972, Hydrogen peroxide stress, treatment (Solexa)
GSE34826_GSM855973, Hydrogen peroxide stress, treatment (Solexa)
Fe deprivation
TAP media
GSE35305_GSM865537, Fe repletion #1 (control) (Solexa)
GSE35305_GSM865538, Fe repletion #2 (control) (Solexa)
GSE35305_GSM865539, Fe deficient #1 (Solexa)
GSE35305_GSM865540, Fe deficient #2 (Solexa)
GSE35305_GSM865541, Fe deficient #3 (Solexa)
GSE35305_GSM865542, Fe limitation #1 (Solexa)
GSE35305_GSM865543, Fe limitation #2 (Solexa)
GSE35305_GSM865544, Fe limitation #3 (Solexa)
Minimal media
GSE35305_GSM865545, Fe repletion #1 (control) (Solexa)
GSE35305_GSM865546, Fe repletion #2 (control) (Solexa)
GSE35305_GSM865547, Fe repletion #3 (control) (Solexa)
GSE35305_GSM865548, Fe repletion #4 (control) (Solexa)
GSE35305_GSM865549, Fe deficient #1 (Solexa)
GSE35305_GSM865550, Fe deficient #2 (Solexa)
GSE35305_GSM865551, Fe deficient #3 (Solexa)
GSE35305_GSM865552, Fe deficient #4 (Solexa)
GSE35305_GSM865553, Fe limitation #1 (Solexa)
GSE35305_GSM865554, Fe limitation #2 (Solexa)
GSE35305_GSM865555, Fe limitation #3 (Solexa)
GSE35305_GSM865556, Fe limitation #4 (Solexa)
